A B C D E F G H I K L M N O P Q R S T U V W

C

cancel() - Method in class edu.harvard.mgh.purcell.gCLINE.data.AutoUpdater
runs the Timer's cancel and set the opStatis to null for garbage collection.
cancel - Variable in class edu.harvard.mgh.purcell.gCLINE.EditFolderDialog
 
cancel - Variable in class edu.harvard.mgh.purcell.gCLINE.EditOpDialog
 
cancel - Variable in class edu.harvard.mgh.purcell.gCLINE.LinkNewFileDialog
An ActionListener that closes the dialog without doing anything.
changeTransitFile(String[], boolean) - Method in class edu.harvard.mgh.purcell.gCLINE.StartFrame
Tell the file transfur status that there is a change in the files being transfered.
childrenFile(String[], DefaultMutableTreeNode) - Method in class edu.harvard.mgh.purcell.gCLINE.HierarchyDialog
 
childrenOp(String, DefaultMutableTreeNode) - Method in class edu.harvard.mgh.purcell.gCLINE.HierarchyDialog
 
cline - Variable in class edu.harvard.mgh.purcell.gCLINE.data.OperationInfo
A String that holds the command line for this operation.
CLINE_KEY - Static variable in interface edu.harvard.mgh.purcell.gCLINE.data.KeyWords
key word for the command line attributes
clineText - Variable in class edu.harvard.mgh.purcell.gCLINE.EditOpDialog
 
close - Variable in class edu.harvard.mgh.purcell.gCLINE.EditFolderDialog
 
closeDialog - Variable in class edu.harvard.mgh.purcell.gCLINE.EditOpDialog
 
closing - Variable in class edu.harvard.mgh.purcell.gCLINE.StartFrame
An ActionListener that closers the gui.
command - Variable in class edu.harvard.mgh.purcell.gCLINE.data.RunCommand
 
command - Variable in class edu.harvard.mgh.purcell.gCLINE.EditOpDialog
 
COMMAND_KEY - Static variable in interface edu.harvard.mgh.purcell.gCLINE.data.KeyWords
command key
COMMAND_PREFIX_KEY - Static variable in interface edu.harvard.mgh.purcell.gCLINE.data.KeyWords
PLINK prefix key
COMPLETE - Static variable in class edu.harvard.mgh.purcell.gCLINE.data.AutoUpdater
Flags a completed operation
Configure - Class in edu.harvard.mgh.purcell.gCLINE.general
Configure local and remote parameters.
Configure(Record) - Constructor for class edu.harvard.mgh.purcell.gCLINE.general.Configure
Create a configuration dialog that edits the configuration of the current record.
conn - Variable in class edu.harvard.mgh.purcell.gCLINE.data.Record
A String that holds the ssh connection.
conn - Variable in class edu.harvard.mgh.purcell.gCLINE.data.RunCommand
 
conn - Variable in class edu.harvard.mgh.purcell.gCLINE.general.GCFileChooser
 
conn - Variable in class edu.harvard.mgh.purcell.gCLINE.tester.Open
 
connect() - Method in class edu.harvard.mgh.purcell.gCLINE.data.Record
 
connect(ErrorManager, JFrame, String, String, int) - Static method in class edu.harvard.mgh.purcell.gCLINE.data.Record
Connect the ssh client.
createAltEditor() - Method in class edu.harvard.mgh.purcell.gCLINE.general.Configure
Create a JPanel that contains alternative editor
createButton() - Method in class edu.harvard.mgh.purcell.gCLINE.general.Configure
Create a panel that has both the ok and cancel buttons.
createButton() - Method in class edu.harvard.mgh.purcell.gCLINE.general.GCFileChooser
Create a button panel for the remote dialog.
createButton() - Method in class edu.harvard.mgh.purcell.gCLINE.tester.Open
Create a panel to hold the butttons.
createButtonPane() - Method in class edu.harvard.mgh.purcell.gCLINE.LinkNewFileDialog
Create a panel to hold the ok/cancel buttons.
createButtons() - Method in class edu.harvard.mgh.purcell.gCLINE.EditFolderDialog
 
createButtonsPanel() - Method in class edu.harvard.mgh.purcell.gCLINE.DeleteOpDialog
Create a JPanel that holds the buttons for this dialog.
createConnection() - Method in class edu.harvard.mgh.purcell.gCLINE.tester.Open
Create a panel that holds the connection information.
createContent(DefaultListModel) - Method in class edu.harvard.mgh.purcell.gCLINE.general.GCFileChooser
 
createError(String, String) - Method in class edu.harvard.mgh.purcell.gCLINE.general.ErrorManager
Create an error message with a citation.
createExicute() - Method in class edu.harvard.mgh.purcell.gCLINE.PopUpMenu
 
createExicute() - Method in class edu.harvard.mgh.purcell.gCLINE.tester.TestFrame.myPopUpMenu
 
createFileList() - Method in class edu.harvard.mgh.purcell.gCLINE.general.GCFileChooser
 
createFilePane() - Method in class edu.harvard.mgh.purcell.gCLINE.LinkNewFileDialog
Create the panel that holds the file text box and corrisponding browse button.
createFilePanel(String[], boolean) - Method in class edu.harvard.mgh.purcell.gCLINE.DeleteOpDialog
Find files attached to all the operaitons and initalize the appropreate panels.
createFiles() - Method in class edu.harvard.mgh.purcell.gCLINE.EditFolderDialog
 
createFormsMenu() - Method in class edu.harvard.mgh.purcell.gCLINE.tester.MenuBarMain
Create the menu for command specific forms.
createFormSpecific() - Method in class edu.harvard.mgh.purcell.gCLINE.general.Configure
 
createFormSpecific() - Method in class edu.harvard.mgh.purcell.gCLINE.tester.TestFrame.StartFrameConfig
 
createInOutPane() - Method in class edu.harvard.mgh.purcell.gCLINE.LinkNewFileDialog
Create a JPanel that allows the user to select the file as either an input or output file.
createLocal() - Method in class edu.harvard.mgh.purcell.gCLINE.tester.Open
Create the panel that holds the local project field and associated button.
createMessage(String, String) - Method in class edu.harvard.mgh.purcell.gCLINE.general.ErrorManager
Create a message with a citation.
createOpPanel(String[]) - Method in class edu.harvard.mgh.purcell.gCLINE.DeleteOpDialog
Creat a Panel that has all the operation names with the check box to flag confirmation of deletion
createPopUp(StartFrame, Record, String[], String[]) - Method in class edu.harvard.mgh.purcell.gCLINE.pane.FolderView
 
createPopUp(StartFrame, Record, String[], String[]) - Method in class edu.harvard.mgh.purcell.gCLINE.pane.OpView
 
createPopUp(StartFrame, Record, String[], String[]) - Method in class edu.harvard.mgh.purcell.gCLINE.tester.TestFrame.myFolderView
 
createPopUp(StartFrame, Record, String[], String[]) - Method in class edu.harvard.mgh.purcell.gCLINE.tester.TestFrame.myOpView
 
createProjectMenu() - Method in class edu.harvard.mgh.purcell.gCLINE.tester.MenuBarMain
Create the menu for general project operatoins.
createRemote() - Method in class edu.harvard.mgh.purcell.gCLINE.tester.Open
Create a panel that holds the remote project name.
createRemoteFlag() - Method in class edu.harvard.mgh.purcell.gCLINE.tester.Open
Create a panel to hold the remote flag.
createTree() - Method in class edu.harvard.mgh.purcell.gCLINE.HierarchyDialog
 
createUpdate() - Method in class edu.harvard.mgh.purcell.gCLINE.general.Configure
 
currentDir - Variable in class edu.harvard.mgh.purcell.gCLINE.general.GCFileChooser
 
currentFile - Variable in class edu.harvard.mgh.purcell.gCLINE.pane.FileView
 

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