Uses of Class
edu.harvard.mgh.purcell.gPLINK2.baseForm.Form

Packages that use Form
edu.harvard.mgh.purcell.gPLINK2.baseForm   
edu.harvard.mgh.purcell.gPLINK2.forms   
 

Uses of Form in edu.harvard.mgh.purcell.gPLINK2.baseForm
 

Fields in edu.harvard.mgh.purcell.gPLINK2.baseForm declared as Form
private  Form ThresholdDialog.parent
          The form that this dialog is attached to
private  Form FilterDialog.parent
           
private  Form OutputPane.parentForm
          The form this output pane is going to appear in.
private  Form InputPane.parentForm
          The dialog that we want to attach our file name browsing window to.
 

Constructors in edu.harvard.mgh.purcell.gPLINK2.baseForm with parameters of type Form
FilterDialog(Form owner)
          Constructor
InputPane(GPLINK p, Form p2)
          Create an input pane for PLINK forms.
OutputPane(Form p, java.lang.String givenop_log_ext, java.util.Vector<java.lang.String> givenHomeFiles, java.lang.String homeFolder)
           
ThresholdDialog(Form givenParent)
          Create a dialog to allow the user to specify threshold values
 

Uses of Form in edu.harvard.mgh.purcell.gPLINK2.forms
 

Subclasses of Form in edu.harvard.mgh.purcell.gPLINK2.forms
 class AlleleAssoc
          Creates a form that does a basic --assoc test
 class AlleleFreq
          Create a form that allows the user to test for Allele frequency.
 class Basic
          Create a form that will provide basic summery statistics for a file set.
 class CCAssoc
           
 class Clustering
          Form for the clustering command --cluster
 class FamAssoc
           
 class GenFileSet
          Reformat a fileset.
 class HapCCAssoc
          A form that allows the user to create a Haplotype-based C/C test plink command line
 class HaploFreq
           
 class HaploPhase
           
 class HapTDTAssoc
          A haplotype, family based association test form.
 class HardyWinEq
          Create a form that checks the hardy weinburg equalibrium of a given data set.
 class HomozRuns
           
 class IBSdist
          Create an ibs distance matrix form.
 class IndHetz
           
 class MendelErr
           
 class Merge
          Merge two file sets.
 class Missing
          Create a Form to test for missing data using PLINK "--missing".
 class NearNeigh
          Allow the user to create a nearest neighbour command.
 class QuantTrtInt
          A Quantitative trait interaction form.
 class Regression
          A linear/logistic regression form.
 class SetAssoc
          A Set based association file.
 class StratAnaly
           
 class Validate
          Create a form that will provide basic summery statistics for a file set.