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Packages that use Form | |
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edu.harvard.mgh.purcell.gPLINK2.baseForm | |
edu.harvard.mgh.purcell.gPLINK2.forms |
Uses of Form in edu.harvard.mgh.purcell.gPLINK2.baseForm |
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Fields in edu.harvard.mgh.purcell.gPLINK2.baseForm declared as Form | |
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private Form |
ThresholdDialog.parent
The form that this dialog is attached to |
private Form |
FilterDialog.parent
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private Form |
OutputPane.parentForm
The form this output pane is going to appear in. |
private Form |
InputPane.parentForm
The dialog that we want to attach our file name browsing window to. |
Constructors in edu.harvard.mgh.purcell.gPLINK2.baseForm with parameters of type Form | |
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FilterDialog(Form owner)
Constructor |
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InputPane(GPLINK p,
Form p2)
Create an input pane for PLINK forms. |
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OutputPane(Form p,
java.lang.String givenop_log_ext,
java.util.Vector<java.lang.String> givenHomeFiles,
java.lang.String homeFolder)
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ThresholdDialog(Form givenParent)
Create a dialog to allow the user to specify threshold values |
Uses of Form in edu.harvard.mgh.purcell.gPLINK2.forms |
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Subclasses of Form in edu.harvard.mgh.purcell.gPLINK2.forms | |
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class |
AlleleAssoc
Creates a form that does a basic --assoc test |
class |
AlleleFreq
Create a form that allows the user to test for Allele frequency. |
class |
Basic
Create a form that will provide basic summery statistics for a file set. |
class |
CCAssoc
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class |
Clustering
Form for the clustering command --cluster |
class |
FamAssoc
|
class |
GenFileSet
Reformat a fileset. |
class |
HapCCAssoc
A form that allows the user to create a Haplotype-based C/C test plink command line |
class |
HaploFreq
|
class |
HaploPhase
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class |
HapTDTAssoc
A haplotype, family based association test form. |
class |
HardyWinEq
Create a form that checks the hardy weinburg equalibrium of a given data set. |
class |
HomozRuns
|
class |
IBSdist
Create an ibs distance matrix form. |
class |
IndHetz
|
class |
MendelErr
|
class |
Merge
Merge two file sets. |
class |
Missing
Create a Form to test for missing data using PLINK "--missing". |
class |
NearNeigh
Allow the user to create a nearest neighbour command. |
class |
QuantTrtInt
A Quantitative trait interaction form. |
class |
Regression
A linear/logistic regression form. |
class |
SetAssoc
A Set based association file. |
class |
StratAnaly
|
class |
Validate
Create a form that will provide basic summery statistics for a file set. |
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