Output files expected:

Mrecode-recode.ped 	Recoded PED file
Mrecode-recode.map	Recoded MAP file

Mrecode12-recode.ped 	Recoded PED file
Mrecode12-recode.map 	Recoded MAP file

MrecodeAD-recode.ped 	Recoded PED file
MrecodeAD-recode.map 	Recoded MAP file

Mmakebed.bed 	Binary PED file
Mmakebed.bim 	Binary MAP file
Mmakebed.fam 	Binary FAM file

MmergeP1-recode.ped 	Recoded PED file
MmergeP1-recode.map 	Recoded MAP file

MmergeP2-recode.ped 	Recoded PED file
MmergeP2-recode.map 	Recoded MAP file

MmergeP3-recode.ped 	Recoded PED file
MmergeP3-recode.map 	Recoded MAP file

MmergeP4-recode.ped 	Recoded PED file
MmergeP4-recode.map 	Recoded MAP file

MmergeP5-recode.ped 	Recoded PED file
MmergeP5-recode.map 	Recoded MAP file

MmergeP6.diff 	Difference file
MmergeP6-recode.ped 	Recoded PED file
MmergeP6-recode.map 	Recoded MAP file

MmergeP7.diff 	Difference file
MmergeP7-recode.ped 	Recoded PED file
MmergeP7-recode.map 	Recoded MAP file

MextractP1-recode.ped 	Recoded PED file
MextractP1-recode.map 	Recoded MAP file

MextractP2.bed 	Binary PED file
MextractP2.bim 	Binary MAP file
MextractP2.fam 	Binary FAM file